During their own attempt to kidnap Count Dooku, Anakin and Obi-Wan discover that the Sith Lord has already been captured by pirates. Hondo Ohnaka and his gang of pirates hold Dooku captive in their den on Florrum, and hold him for ransom. It's up to Anakin and Obi-Wan to see if the offer is too good to be true.

Anakin and Obi-Wan have been duped and are being held for ransom along with Count Dooku by the pirate chief Hondo Ohnaka and his second-in-command, Turk Falso. While Anakin, Obi-Wan and Dooku unsuccessfully attempt to escape, the Republic sends the ransom via a special envoy, including Representative Jar Jar Binks. When Falso tries to steal the ransom from his boss by shooting down the shuttle, the only survivors are a squad of clones and Jar Jar, who as the most senior officer alive, has to take charge of the mission. It becomes a race against time as Jar Jar rushes to deliver the ransom to take custody of Dooku and save the Jedi.

Anakin, Obi-Wan, and Ahsoka crash on Felucia and seek aid from the local spice farmers only to learn that the farmers are the ones who are in real need. Beset by Hondo Ohnaka and his band of pirates who plan to steal their crop, the farmers have contracted four deadly bounty hunters to protect their wares. In an unlikely partnership, the Jedi must work with the farmers' hired guns to beat back Hondo and his brigands.

Following a nefarious attempt to murder Anakin Skywalker and Mace Windu on Vanqor, Boba Fett and Aurra Sing go into hiding. Jedi Master Plo Koon and Ahsoka Tano set out to capture the bounty hunters. While combing through the lower depths of the Coruscant underworld, Plo and Ahsoka finally learn that Fett and his group are hiding out on Florrum. In a dramatic showdown, Fett is abandoned by Aurra Sing, leaving young Boba angry and bitter in Republic custody.

With Ahsoka captured by Hondo's pirates, the younglings work together to infiltrate the pirates' den, using their wits and courage to deceive Hondo Ohnaka and launch a daring rescue.

When General Grievous launches a full-scale attack on the pirate base on Florrum, Ahsoka and the younglings fight side-by-side with Hondo and his pirates to turn back the Separatist forces.